BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B09SP1|AL425988
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1676 1561 0.0
>3x_Contig1676
Length = 15800
Score = 1561 bits (787), Expect = 0.0
Identities = 795/797 (99%), Gaps = 1/797 (0%)
Strand = Plus / Minus
Query: 1 gatcaccgacatcatcaatcatagaaattgcagtgacattagggaaaccggaagtaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6773 gatcaccgacatcatcaatcatagaaattgcagtgacattagggaaaccggaagtaggta 6714
Query: 61 atcccattgctgctgaacataggaacgcggcaaccattattaataaccttgaatggtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6713 atcccattgctgctgaacataggaacgcggcaaccattattaataaccttgaatggtctc 6654
Query: 121 caccaggtagatttgatccgatctctttcattaatgggacgatgatcatagcagcgactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6653 caccaggtagatttgatccgatctctttcattaatgggacgatgatcatagcagcgactg 6594
Query: 181 tatgagagacaaaagtagccatagtcaatatgacgatgccgaatatcaatacgatttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 tatgagagacaaaagtagccatagtcaatatgacgatgccgaatatcaatacgatttgga 6534
Query: 241 aaaccggtttagtttcaattgactctttgattatcgatgcaatagttgagagtdagcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6533 aaaccggtttagtttcaattgactctttgattatcgatgcaatagttgagagtaagcctg 6474
Query: 301 aagaggtgacagctttgcccaaagtagttccacccatcgctaaaatgacaatagtccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6473 aagaggtgacagctttgcccaaagtagttccacccatcgctaaaatgacaatagtccaca 6414
Query: 361 tgaaattgttgaaatcatcagaatctaaaataccagttccgaaaaacaacaacattggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6413 tgaaattgttgaaatcatcagaatctaaaataccagttccgaaaaacaacaacattggaa 6354
Query: 421 tgaccgaaatgatacccatctctccgaaaacatccttcaattggttagctaaacaccata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6353 tgaccgaaatgatacccatctctccgaaaacatccttcaattggttagctaaacaccata 6294
Query: 481 atacgattgtgagtatggtaacgatcgtgatataccactgctgcacagtgaatggatccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6293 atacgattgtgagtatggtaacgatcgtgatataccactgctgcacagtgaatggatccg 6234
Query: 541 aaattggatgatatttcaaaattttcaaattgctgtccgga-ggaaagtcaaaagtagta 599
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6233 aaattggatgatatttcaaaattttcaaattgctgtccggagggaaagtcaaaagtagta 6174
Query: 600 aacaccagatgacaacgatacaaatgacacaaacaggtaatgatacaataaaccattggc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6173 aacaccagatgacaacgatacaaatgacacaaacaggtaatgatacaataaaccattggc 6114
Query: 660 cccatgaaggtggcggatccatcatacctatcgaaatgatgttttgaggggaagcaatag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6113 cccatgaaggtggcggatccatcatacctatcgaaatgatgttttgaggggaagcaatag 6054
Query: 720 gggatgccatacctccaatattggatgccaatgcaatacctaaaatcaatgattttgcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6053 gggatgccatacctccaatattggatgccaatgcaatacctaaaatcaatgattttgcaa 5994
Query: 780 atgtactgcctttaggc 796
|||||||||||||||||
Sbjct: 5993 atgtactgcctttaggc 5977
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6152
Number of Sequences: 1807
Number of extensions: 6152
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)